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    • BLAST: Basic Local Alignment Search Tool - NCBI

    1. https://www.ncbi.nlm.nih.gov
    2. blast
    1. https://www.ncbi.nlm.nih.gov
    2. blast

    2023/11/28 -The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to ...


    Chromosome-level genome assembly and annotation of eel goby ... - Nature

    1. https://www.nature.com
    2. scientific data
    3. data descriptors

    2024/2/2 -BLAT - The BLAST-like alignment tool. Genome Res. 12, 656–664, https://doi.org/10.1101/gr.229202 (2002). Article CAS PubMed PubMed Central Google Scholar.


    Conservation of a Chromosome 8 Inversion and Exon Mutations ...

    1. https://link.springer.com
    2. article

    2024/4/30 -GULOP sequences were identified by BLAT analysis with a GULO gene or GULOP sequence from a taxonomically similar species. BLAT differs from BLAST in that BLAT ...


    Performance evaluation of pblat. a timing benchmarks of blat and pblat...

    1. https://www.researchgate.net
    2. figure
    3. Performance-eval...

    2024/2/5 -Background The blat is a widely used sequence alignment tool. It is especially useful for aligning long sequences and gapped mapping, which cannot be performed ...


    Chromosome-level genome provides insight into the evolution and ...

    1. https://bmcgenomics.biomedcentral.com
    2. articles
    1. https://bmcgenomics.biomedcentral.com
    2. articles

    2024/1/22 -BLAT-the BLAST-like alignment tool. Genome Res. 2002;12(4):656–64. CAS PubMed PubMed Central Google Scholar. Edgar RC. MUSCLE: multiple sequence alignment ...


    chromosome-level genome assembly of Agave hybrid NO.11648 provides ...

    1. https://academic.oup.com
    2. article
    3. uhad269

    2024/2/7 -To predict pseudogene, the protein-coding gene sequences were aligned to the genome sequences to search for orthologous and paralogous fragments using BLAT [65] ...


    A high-quality chromosome-level genome assembly of the Chinese ...

    1. https://www.nature.com
    2. scientific data
    3. data descriptors

    2024/3/28 -BLAT–the BLAST-like alignment tool. Genome Res. 12, 656–664 (2002). CAS PubMed PubMed Central Google Scholar. Birney, E., Clamp, M. & Durbin, R. GeneWise and ...


    Fundamental principles of chromosome organization ... - bioRxiv

    1. https://www.biorxiv.org
    2. content
    1. https://www.biorxiv.org
    2. content

    2024/3/8 -Blat, Y., Protacio, R.U., Hunter, N., and Kleckner, N. (2002). Physical and Functional Interactions among Basic Chromosome Organizational Features Govern ...


    Human assembly and gene annotation - Ensembl

    1. https://www.ensembl.org
    2. Info
    3. Annotation
    1. https://www.ensembl.org
    2. Info
    3. Annotation

    2024/1/13 -Ensembl Home. Loading… BLAST/BLAT · VEP · Tools · BioMart · Downloads · Help & Docs ... chromosome length total 3.1 Gb (excluding haplotypes). It also includes ...


    Chromosome-level genome assembly of hadal snailfish reveals ... - eLife

    1. https://elifesciences.org
    2. articles
    1. https://elifesciences.org
    2. articles

    2023/12/22 -(3) We searched for the location of this gene on the hadal snailfish genome using BLAT v. 35 (Kent, 2002) and predicted the gene structure using GeneWise v2.4.1 ...