2024/3/15 -All fastq files were then treated with AdapterRemoval [30] and subsequently aligned to the human reference genome GRCh38dh (http://ftp.1000genomes.ebi.ac.uk/ ...
A Comprehensive Guide to Analyzing RNA-Seq Data: From Raw Reads to ...
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2024/3/23 -Trimmomatic is used to remove low-quality bases and adapter sequences from raw reads, improving the overall quality of the sequencing data. FastQC Analysis of ...
2024/3/22 -Genomic regions (exome and high-confidence) and high-confidence variants were taken from the SEQC2 FTP site [26]. ... Trimmomatic was used for trimming. bwa and ...
2024/4/17 -Read trimming: Following the quality control, the reads undergo trimming to eliminate low-quality bases and adapter sequences, employing Trimmomatic with ...
GSM7918652 - GEO Accession viewer
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2024/3/4 -Remove low quality bases and adaptor sequences via Trimmomatic. Align trimmed data to rRNA sequene to remove reads from ribosomal RNAs. Align clean data to ...
Bioinformatics - Genomics Research and Technology Hub (GRT Hub)
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2024/4/10 -The Bioinformatics Core has expertise in design and strategic planning for experiments utilizing optical mapping, high-throughput sequencing, SNP, methylation, ...
Assessment and clinical utility of metagenomic next-generation ...
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2024/4/1 -This study aims to compare the diagnostic efficacy of metagenomic next-generation sequencing (mNGS) to traditional diagnostic methods in patients with lower ...
Negligible effects of read trimming on the accuracy of germline ... - AWS
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4日前 -2 (Chen et al., 2018), Trimmomatic (RRID:SCR_011848) v. ... GIAB FTP site: Raw whole-genome sequencing data for HG001. ... GIAB FTP site: Raw whole-genome ...
2024/3/6 -polycarpa were estimated with short-read data by GCE (ftp://ftp.genomics.org.cn/pub/gce, v1. ... The reads were quality controlled with Trimmomatic using default ...
2024/4/17 -Read trimming: Following the quality control, the reads undergo trimming to eliminate low-quality bases and adapter sequences, employing Trimmomatic with pa-.