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Researchers generate lists of genes through experiments like microarray, next generation sequencing, etc. DAVID is a popular, open source, ...
YouTube-NIAID Bioinformatics
2013/05/03動画の見どころ1/10枚目 List of genes
動画の見どころ2/10枚目 Paste the List of Genes
動画の見どころ3/10枚目 Selecting gene symbols
動画の見どころ4/10枚目 Submit the List
動画の見どころ5/10枚目 Adding multiple organisms
動画の見どころ6/10枚目 Understanding the results page
動画の見どころ7/10枚目 DAVID Categories
動画の見どころ8/10枚目 Enrichment Analysis Results
動画の見どころ9/10枚目 Downloading the results
動画の見どころ10/10枚目 Applying additional filters
Dear Genomic Gurus, Thank for the great video. I am wondering whether we can perform overrepresentation analysis using DAVID tool in ...
YouTube-Genomics Guru
2020/07/14動画の見どころ1/10枚目 Functional annotation tool
動画の見どころ2/10枚目 Gene Ontology results
動画の見どころ3/10枚目 List of GO Terms
動画の見どころ4/10枚目 Understanding the output
動画の見どころ5/10枚目 Molecular function
動画の見どころ6/10枚目 Functional Categories
動画の見どころ7/10枚目 KEGG Pathways
動画の見どころ8/10枚目 Downloading a pathway image
動画の見どころ9/10枚目 Cluster diagrams
動画の見どころ10/10枚目 Clustering of annotations
A brief introduction to and tutorial for Database for Annotation, Visualization and Integrated Discovery (DAVID). STAT115 Spring 2016.
YouTube-Melinda Song
2016/05/04How to use DAVID for functional annotation of genes. Genomics Guru•70K ... Network Visualization and Analysis with Cytoscape. Bioinformatics ...
YouTube-NIAID Bioinformatics
2013/05/03... Database for Annotation, Visualization and Integrated Discoveryの頭文字に由来しています。 ムービーではサンプルデータとして、NCBI GEOより ...
YouTube-TogoTV
2012/09/26For pathway enrichment, we integrated our results with tools offered by the Database for Annotation, Visualization and Integrated Discovery (DAVID) and ...
NSF IGERT 2012 Video & Poster Competition
2012/05/23Explore all the features of Geneious Prime including sequence alignment, mapping, Sanger and NGS analysis, molecular cloning and primer design.
Geneious
2017/09/06These 74 common genes were analyzed using Database for Annotation, Visualization, and Integrated Discovery (DAVID), to study their Gene ...
YouTube-OmicsLogic
2022/06/03... Database for Annotation, Visualization and Integrated Discoveryの頭文字に由来しています。 ムービーではサンプルデータとして、NCBI GEOより取得 ...
YouTube-TogoTV
2009/09/24... annotation, and pathway analysis with DAVID (Database for Annotation, Visualization and Integrated Discovery). Lecture 3 will explain the ...
YouTube-Danny Arends
2022/11/27Sound check and introduction
Overview for today
Quick overview of the project data
Adjusting the pipeline, input from the command line
Executing the pipeline for each SRA sample
Copy BAM files to windows using a shared folder in VirtualBox
Preparing a new R script, required packages for today
Building the exons per gene database
Adding the install script to the Github gist
Computing the length in base pairs of all transcripts
Loading the BAM alignment files into R
Extracting raw read counts from BAM files
Computing RPKM values in R
Violin plots of the RPKM distribution per sample
Quantile normalization & log2 transformation of RPKM values
Computing differential gene expression and fold change
Creating the volcano plot
Subset up/down regulated genes, a clustered heatmap
Creating an overview table for publication / supplemental files
biomaRt for gene annotation of up/down regulated genes
Data to Excel
Pathway over-representation analysis using DAVID
Microsoft Excel trick: Prevent genes turning into dates
Pathway over-representation analysis using DAVID (Continued)
Overview, Questions, and Outro
In this video you will learn how to use DAVID database to retrieve KEGG Pathways, BP Pathways, MF Pathways and CC Pathways and how to ...
YouTube-Muhammad Salman Akbar Saani
2022/07/27... Discovery · Clinical · Real-World ... March 27, 2017. Statistical analysis, visualization ... April 06, 2017. Using workflows to perform integrated ...
tv.qiagenbioinformatics.com
2019/08/01Data are contributed from different organizations and companies around the world. C-Path has extensive experience in building such integrated databases for many ...
Critical Path Institute-Critical Path Institute
1か月前Create an empty dataset and import or associate your data · In the Google Cloud console, in the Vertex AI section, go to the Datasets page. · Click Create to open ...
Google Cloud-Google Cloud Tech
2021/05/23Integrated ML frameworks. PyTorch · TensorFlow ... Create an annotation set · Delete an annotation set · Add labels ... Configure visualization settings · Improve ...
Google Cloud-Google Cloud Tech
2021/05/23Learn about the latest tools, technologies, and advancements to help you create even better apps across Apple platforms, including the...
Apple Developer
2023/06/06It is a visual discovery engine for finding ideas for recipes, fashion, weddings, home decoration, and much more. In the last year, the company decided to ...
Knowledge Graph Conference
2022/02/17With a free Chrome Extension and the ability to import/export as well as automate annotations, you'll be better equipped to know what your data is trying to ...
Expert Dojo
2023/01/31a false discovery cutoff, that includes the best ... The protein sequence database is stored in a FASTA file. ... Typical follow up analyses include visualization, ...
GTN Videos
2023/02/18... annotation and visualisation. We will get to ... Discover differences between small variant ... Genome Visualization. Bioinformatics DotCa ...
YouTube-European Bioinformatics Institute - EMBL-EBI
2022/03/31動画の見どころ1/10枚目 Applications of genomic variant calling
動画の見どころ2/10枚目 Single nucleotide variant
動画の見どころ3/10枚目 Aligning with gaps
動画の見どころ4/10枚目 Haplotype inference
動画の見どころ5/10枚目 Genomes in individual cells
動画の見どころ6/10枚目 How long reads change variant calling
動画の見どころ7/10枚目 Allelic depth
動画の見どころ8/10枚目 Modeling variants on the protein level
動画の見どころ9/10枚目 Removing PCR duplicates
動画の見どころ10/10枚目 What is variant genotyping?