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This is a basic hands-on tutorial to download sequencing data from SRA NCBI using SRA Toolkit. In this video, I have demonstrated how to ...
YouTube-Bioinformagician
2022/01/05This is an overview of the Supplemental Retirement Accounts (SRA) available at The Ohio State University. To access the presentation slides ...
YouTube-Ohio State Human Resources
2024/02/02Bioinformatics #DataScience #datamining #NCBI This tutorial shows you the step by step procedure to download sequence data(fastq reads) from ...
YouTube-Bioinformatics Coach
2021/10/18NGS #Sequencing #datascience For Bioinformatics and NGS Analysis services please contact farhan@jgiconsulting.pk visit: ...
YouTube-Farhan Haq
2022/02/07Many new studies include RNA sequencing data. In this webinar we will go through the process of downloading and importing SRA data using the ...
YouTube-Qlucore
2021/05/12Bioinformatics #DataScience #NCBI How to install SRA Toolkit Using Anaconda: https://youtu.be/Q4jbA2UEP44 Using binaries: ...
YouTube-Bioinformatics Coach
2021/11/03動画の見どころ1/10枚目 Intro
動画の見どころ2/10枚目 Install SRA Toolkit
動画の見どころ3/10枚目 Create a directory
動画の見どころ4/10枚目 Download single length reads
動画の見どころ5/10枚目 Sequence exploration
動画の見どころ6/10枚目 Read the sequence file in a text editor
動画の見どころ7/10枚目 Customize the output file
動画の見どころ8/10枚目 Explore the output file
動画の見どころ9/10枚目 Sequence extraction
動画の見どころ10/10枚目 Conclusion
For Bioinformatics and NGS Analysis services please contact farhan@jgiconsulting.pk visit: https://jgiconsulting.pk/overview/ This is the ...
YouTube-Farhan Haq
2022/02/04Visit the link below and register an account to use the music store, when you register successfully you will have 1 month of trial Link: ...
YouTube-Music Waves Media
2023/10/21This is a brief tutorial on how to establish a virtual machine instance with Amazon Web Services, then install, configure, and test the SRA ...
YouTube-National Library of Medicine
2020/03/01Before getting started in the Security Risk Assessment Tool, learn about the tool's basic navigation and features.
YouTube-Office of the National Coordinator for Health IT
2014/04/17We have identified the NGS data in the NCBI SRA, and now it's time to download the file using the command line application SRA toolkit.
YouTube-VascoElbrecht
2014/12/30動画の見どころ1/7枚目 Download and install the NCBI SRA toolkit to download the SRA data
動画の見どころ2/7枚目 Download the SRA file (SRR1145747) using
動画の見どころ3/7枚目 Convert the SRA file to a fastQ file which can be imported into Geneious and other Programs using
動画の見どころ4/7枚目 Check the data quality of the NGS data using the program FastQC available here
動画の見どころ5/7枚目 Import the fastQ file into geneious
動画の見どころ6/7枚目 Data subsetting, you don not want to use all 11 million sequences, computation will take forever. 500.000 will be enough for the beginning.
動画の見どころ7/7枚目 Extract forward and reverse sequence from the 500k reads, at the moment they are concatenated and can't be assembled like this (The PE reads don't have overlap).
This is a recording of an SRA Tool presentation given on September 24, 2021.
YouTube-Office of the National Coordinator for Health IT
2022/03/30動画の見どころ1/10枚目 Welcome
動画の見どころ2/10枚目 What to Expect When Using the SRA Tool
動画の見どころ3/10枚目 SRA Tool Overview: Practice Assets
動画の見どころ4/10枚目 Linking Documents
動画の見どころ5/10枚目 Notes about Conducting a Thorough Assessment
動画の見どころ6/10枚目 Frequently Asked Questions
動画の見どころ7/10枚目 Audience Questions
動画の見どころ8/10枚目 Is this compatible with the PCI industry?
動画の見どころ9/10枚目 Is the tool available for Linux?
動画の見どころ10/10枚目 Closing Remarks
Visit the link below and register an account to use the music store, when you register successfully you will have 7 day trial Link: ...
YouTube-Music Waves Media
1か月前Visit the link below and register an account to use the music store, when you register successfully you will have 7 day trial Link: ...
YouTube-Music Waves Media
1か月前Visit the link below and register an account to use the music store, when you register successfully you will have 1 month of trial Link: ...
YouTube-Music Waves Media
2023/06/11In this video I run through the project that these videos are based on, downloading raw fastq files, running quality control check, ...
YouTube-Alex Soupir
2020/06/24urheiluammunta #SRA #reserviläinen Excellent SRA Etelä-Häme Hätilä 22 shooting competition! Some highlights from this year's 2 gun ...
YouTube-Aawee
2022/08/02Share your videos with friends, family, and the world.
YouTube-Solicitors Regulation Authority
2019/07/02This is a recording of a webinar that took place on September 15th 2022. Topics covered in this webinar include an overview of SRA Tool ...
YouTube-Office of the National Coordinator for Health IT
2022/10/28動画の見どころ1/10枚目 What is the SRA Tool?
動画の見どころ2/10枚目 Downloading and Installing the Tool
動画の見どころ3/10枚目 Saving Your Security Risk Assessment
動画の見どころ4/10枚目 Entering Practice Information
動画の見どころ5/10枚目 Summary Report
動画の見どころ6/10枚目 Flagged Report
動画の見どころ7/10枚目 Detailed Report
動画の見どころ8/10枚目 Enhancements - Excel Workbook
動画の見どころ9/10枚目 Conducting a Thorough Assessment
動画の見どころ10/10枚目 Contact Us
Visit the link below and register an account to use the music store, when you register successfully you will have 1 month of trial Link: ...
YouTube-Music Waves Media
2023/12/05